• Evaluation of Parallel Differential Evolution Implementations on MapReduce and Spark 

      Teijeiro, Diego; Pardo, Xoán C.; Penas, David R.; González, Patricia; Banga, Julio R.; Doallo, Ramón (Springer, 2017-09)
      [Abstract] Global optimization problems arise in many areas of science and engineering, computational and systems biology and bioinformatics among them. Many research efforts have focused on developing parallel metaheuristics ...
    • Multimethod Optimization for Reverse Engineering of Complex Biological Networks 

      González, Patricia; Penas, David R.; Pardo, Xoán C.; Banga, Julio R.; Doallo, Ramón (Association for Computing Machinery, 2018-09)
      [Abstract] Optimization problems appears in different areas of science and engineering. This paper considers the general problem of reverse engineering in computational biology by means of mixed-integer nonlinear dynamic ...
    • Performance Evaluation of Big Data Frameworks for Large-Scale Data Analytics 

      Veiga, Jorge; Expósito, Roberto R.; Pardo, Xoán C.; López Taboada, Guillermo; Touriño, Juan (IEEE Computer Society, 2017-02-06)
      [Abstract] The increasing adoption of Big Data analytics has led to a high demand for efficient technologies in order to manage and process large datasets. Popular MapReduce frameworks such as Hadoop are being replaced by ...
    • The HPS3 Service: Reduction of Cost and Transfer Time for Storing Data on Clouds 

      Veiga, Jorge; López Taboada, Guillermo; Pardo, Xoán C.; Touriño, Juan (IEEE Computer Society, 2015-03-12)
      [Abstract] In the past several years, organizations have been changing their storage methods as the volume of data they managed has increased. The cloud computing paradigm offers new ways of storing data based on scalability ...
    • Using the Cloud for Parameter Estimation Problems: Comparing Spark vs MPI with a Case-Study 

      González, Patricia; Pardo, Xoán C.; Penas, David R.; Teijeiro, Diego; Banga, Julio R.; Doallo, Ramón (Institute of Electrical and Electronics Engineers, 2017-07-13)
      [Abstract] Systems biology is an emerging approach focused in generating new knowledge about complex biological systems by combining experimental data with mathematical modeling and advanced computational techniques. Many ...