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Cryptic diversity and phylogeographic patterns of Mediodactylus species in the Eastern Mediterranean region
dc.contributor.author | Kotsakiozi, Panayiota | |
dc.contributor.author | Antoniou, Aglaia | |
dc.contributor.author | Psonis, Nikolaos | |
dc.contributor.author | Sagonas, Kostas | |
dc.contributor.author | Karameta, Emmanouela | |
dc.contributor.author | Ilgaz, Çetin | |
dc.contributor.author | Kumlutas, Yusuf | |
dc.contributor.author | Aziz, Avcı | |
dc.contributor.author | Jablonski, Daniel | |
dc.contributor.author | Darriba, Diego | |
dc.date.accessioned | 2024-07-23T09:56:14Z | |
dc.date.issued | 2024-08 | |
dc.identifier.citation | P. Kotsakiozi, et al., "Cryptic diversity and phylogeographic patterns of Mediodactylus species in the Eastern Mediterranean region", Molecular Phylogenetics and Evolution, Vol. 197, article 108091, August 2024, doi: 10.1016/j.ympev.2024.108091 | es_ES |
dc.identifier.uri | http://hdl.handle.net/2183/38204 | |
dc.description | Code used for analyses is included in the Supp Material. Genomic data produced have been deposited in SRA NCBI. The Radseq data used in the analyses are available on the NCBI SRA in demultiplexed form, under BioProject number PRJNA1051519 and BioSample accessions SAMN38777126- SAMN38777219. | es_ES |
dc.description | Versión aceptada. ©2024 Elsevier B.V. All rights reserved. This manuscript version is made available under the CC-BY-NC-ND 4.0 license https://creativecommons.org/ licenses/bync-nd/4.0/. This version of the article has been accepted for publication in Journal of Controlled Release. The Version of Record is available online at https://doi.org/10.1016/j.ympev.2024.108091 | es_ES |
dc.description.abstract | [Abstract]: Cryptic diversity poses a great obstacle in our attempts to assess the current biodiversity crisis and may hamper conservation efforts. The gekkonid genus Mediodactylus, a well-known case of hidden species and genetic diversity, has been taxonomically reclassified several times during the last decade. Focusing on the Mediterranean populations, a recent study within the M. kotschyi species complex using classic mtDNA/nuDNA markers suggested the existence of five distinct species, some being endemic and some possibly threatened, yet their relationships have not been fully resolved. Here, we generated genome-wide SNPs (using ddRADseq) and applied molecular species delimitation approaches and population genomic analyses to further disentangle these relationships. Τhe most extensive nuclear dataset, so far, encompassing 2,360 loci and ∼ 699,000 bp from across the genome of Mediodactylus gecko, enabled us to resolve previously obscure phylogenetic relationships among the five, recently elevated, Mediodactylus species and to support the hypothesis that the taxon includes several new, undescribed species. Population genomic analyses within each of the proposed species showed strong genetic structure and high levels of genetic differentiation among populations. | es_ES |
dc.description.sponsorship | This study was part of a broader research project entitled “Adding more Ecology and Genomics in understanding of the biological Diversity: the role of islands as natural laboratories'' and was funded by NSFR 2007-2013 Program for the development, European Social Fund, operational program, education and life learning Ministry of Education and Religious Affairs, managing authority, Co-financed by Greece and The European Union. A.S. was financially supported by the European Union (EU) under Grant Agreement No 101,087,081 (Comp-Biodiv-GR). DD was supported by the Ministry of Science and Innovation of Spain (PID2019-104184RB-I00/AEI/ https://doi-org.accedys.udc.es/10.13039/501100011033) and by the Xunta de Galicia and FEDER funds of the EU under the Centro de Investigación de Galicia accreditation 2019-2022 (ED431G 2019/01). | es_ES |
dc.description.sponsorship | Xunta de Galicia; ED431G 2019/01 | es_ES |
dc.language.iso | eng | es_ES |
dc.publisher | Academic Press Inc. | es_ES |
dc.relation | info:eu-repo/grantAgreement/EC/HE/101087081 | es_ES |
dc.relation | info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-104184RB-I00/ES/DESAFIOS ACTUALES EN HPC: ARQUITECTURAS, SOFTWARE Y APLICACIONES | es_ES |
dc.relation.uri | https://doi.org/10.1016/j.ympev.2024.108091 | es_ES |
dc.rights | Atribución-NoComercial-SinDerivadas 3.0 España | es_ES |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/3.0/es/ | * |
dc.subject | Cryptic species | es_ES |
dc.subject | ddRADseq | es_ES |
dc.subject | Gekkonidae | es_ES |
dc.subject | Phylogenomics | es_ES |
dc.subject | Population genomics | es_ES |
dc.subject | SNPs | es_ES |
dc.title | Cryptic diversity and phylogeographic patterns of Mediodactylus species in the Eastern Mediterranean region | es_ES |
dc.type | info:eu-repo/semantics/article | es_ES |
dc.rights.access | info:eu-repo/semantics/openAccess | es_ES |
dc.date.embargoEndDate | 2025-08-01 | es_ES |
dc.date.embargoLift | 2025-08-01 | |
UDC.journalTitle | Molecular Phylogenetics and Evolution | es_ES |
UDC.volume | 197 | es_ES |
UDC.startPage | 108091 | es_ES |
dc.identifier.doi | 10.1016/j.ympev.2024.108091 |
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