• Hybrid CPU/GPU Acceleration of Detection of 2-SNP Epistatic Interactions in GWAS 

      González-Domínguez, Jorge; Schmidt, Bertil; Kässens, Jan Christian; Wienbrandt, Lars (Springer, 2014-08)
      [Abstract] High-throughput genotyping technologies allow the collection of up to a few million genetic markers (such as SNPs) of an individual within a few minutes of time. Detecting epistasis, such as 2-SNP interactions, ...
    • Multimethod Optimization for Reverse Engineering of Complex Biological Networks 

      González, Patricia; Penas, David R.; Pardo, Xoán C.; Banga, Julio R.; Doallo, Ramón (Association for Computing Machinery, 2018-09)
      [Abstract] Optimization problems appears in different areas of science and engineering. This paper considers the general problem of reverse engineering in computational biology by means of mixed-integer nonlinear dynamic ...
    • Performance Optimization of a Parallel Error Correction Tool 

      Martínez-Sánchez, Marco; Expósito, Roberto R.; Touriño, Juan (MDPI, 2021)
      [Abstract] Due to the continuous development in the field of Next Generation Sequencing (NGS) technologies that have allowed researchers to take advantage of greater genetic samples in less time, it is a matter of relevance ...