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Parallel ant colony optimization for the training of cell signaling networks
(Elsevier, 2022)
[Abstract]: Acquiring a functional comprehension of the deregulation of cell signaling networks in disease allows progress in the development of new therapies and drugs. Computational models are becoming increasingly popular ...
Design and Implementation of an extended collectives library for unified Parallel C
(Springer New York LLC, 2013)
[Abstract] Unified Parallel C (UPC) is a parallel extension of ANSI C based on the Partitioned Global Address Space (PGAS) programming model, which provides a shared memory view that simplifies code development while it ...
Design of scalable Java message-passing communications over InfiniBand
(Springer New York LLC, 2012-07)
[Abstract] This paper presents ibvdev a scalable and efficient low-level Java message-passing communication device over InfiniBand. The continuous increase in the number of cores per processor underscores the need for ...
Performance analysis of HPC applications in the cloud
(Elsevier BV * North-Holland, 2013-01)
[Abstract] The scalability of High Performance Computing (HPC) applications depends heavily on the efficient support of network communications in virtualized environments. However, Infrastructure as a Service (IaaS) providers ...
Java in the High Performance Computing arena: Research, practice and experience
(Elsevier BV, 2013-05-01)
[Abstract] The rising interest in Java for High Performance Computing (HPC) is based on the appealing features of this language for programming multi-core cluster architectures, particularly the built-in networking and ...
Design of efficient Java message-passing collectives on multi-core clusters
(Springer New York LLC, 2011-02)
[Abstract] This paper presents a scalable and efficient Message-Passing in Java (MPJ) collective communication library for parallel computing on multi-core architectures. The continuous increase in the number of cores per ...
Evaluation of messaging middleware for high-performance cloud computing
(Springer U K, 2013-12)
[Abstract]
Cloud computing is posing several challenges, such as security, fault tolerance, access interface singularity, and network constraints, both in terms of latency and bandwidth. In this scenario, the performance ...
Running scientific codes on amazon EC2: a performance analysis of five high-end instances
(Springer New York LLC, 2013)
[Abstract] Amazon Web Services (AWS) is a well-known public Infrastructure-as-a-Service (IaaS) provider whose Elastic Computing Cloud (EC2) o ering includes some instances, known as cluster instances, aimed at High-Performance ...
An Efficient Ant Colony Optimization Framework for HPC Environments
(Elsevier, 2022)
[Abstract] Combinatorial optimization problems arise in many disciplines, both in the basic sciences and in applied fields such as engineering and economics. One of the most popular combinatorial optimization methods is ...