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Design of efficient Java message-passing collectives on multi-core clusters
(Springer New York LLC, 2011-02)
[Abstract] This paper presents a scalable and efficient Message-Passing in Java (MPJ) collective communication library for parallel computing on multi-core architectures. The continuous increase in the number of cores per ...
Evaluation of messaging middleware for high-performance cloud computing
(Springer U K, 2013-12)
[Abstract]
Cloud computing is posing several challenges, such as security, fault tolerance, access interface singularity, and network constraints, both in terms of latency and bandwidth. In this scenario, the performance ...
High-performance computing selection of models of DNA substitution for multicore clusters
(Sage Publications Ltd., 2014)
[Abstract] This paper presents the high-performance computing (HPC) support of jModelTest2, the most popular bioinformatic tool for the statistical selection of models of DNA substitution. As this can demand vast computational ...
UPCBLAS: a library for parallel matrix computations in Unified Parallel C
(John Wiley & Sons Ltd., 2012-09-25)
[Abstract] The popularity of Partitioned Global Address Space (PGAS) languages has increased during the last years thanks to their high programmability and performance through an efficient exploitation of data locality, ...
The Servet 3.0 benchmark suite: characterization of network performance degradation
(Pergamon Press, 2013-11)
[Abstract] Servet is a suite of benchmarks focused on extracting a set of parameters with high influence on the overall performance of multicore clusters. These parameters can be used to optimize the performance of parallel ...
Running scientific codes on amazon EC2: a performance analysis of five high-end instances
(Springer New York LLC, 2013)
[Abstract] Amazon Web Services (AWS) is a well-known public Infrastructure-as-a-Service (IaaS) provider whose Elastic Computing Cloud (EC2) o ering includes some instances, known as cluster instances, aimed at High-Performance ...
Serverless-like platform for container-based YARN clusters
(Elsevier, 2024-06)
[Abstract]: Serverless computing is an emerging paradigm that has gained a lot of relevance in recent years, as it allows users to consume computing resources without worrying about the underlying infrastructure and pay ...
Portable and efficient FFT and DCT algorithms with the Heterogeneous Butterfly Processing Library
(Elsevier, 2019-03)
[Abstract]: The existence of a wide variety of computing devices with very different properties makes essential the development of software that is not only portable among them, but which also adapts to the properties of ...
Optimizing parcel exchange among landowners: A soft alternative to land consolidation
(Elsevier, 2020-01)
[Abstract]: For decades, public policy has favored the use of land consolidation to reduce the fragmentation of land ownership. Private actors, on the other hand, have focused on the purchase, rental and exchange of land ...
PARamrfinder: detecting allele-specific DNA methylation on multicore clusters
(Springer, 2024-01)
[Abstract]: The discovery of Allele-Specific Methylation (ASM) is an important research field in biology as it regulates genomic imprinting, which has been identified as the cause of some genetic diseases. Nevertheless, ...