• An out-of-core method for GPU image mapping on large 3D scenarios of the real world 

      Jurado, Juan M.; Padrón, Emilio J.; Jiménez, J. Roberto; Ortega, Lidia (Elsevier, 2022)
      [Abstract] Image mapping on 3D huge scenarios of the real world is one of the most fundamental and computational expensive processes for the integration of multi-source sensing data. Recent studies focused on the observation ...
    • FastMPJ: a scalable and efficient Java message-passing library 

      Expósito, Roberto R.; Ramos Garea, Sabela; Taboada, Guillermo L.; Touriño, Juan; Doallo, Ramón (Springer New York LLC, 2014)
      [Abstract] The performance and scalability of communications are key for high performance computing (HPC) applications in the current multi-core era. Despite the significant benefits (e.g., productivity, portability, ...
    • Parallel and Scalable Short-Read Alignment on Multi-Core Clusters Using UPC++ 

      Liu, Yongchao; Schmidt, Bertil; González-Domínguez, Jorge (Johannes Gutenberg University Mainz, 2016)
      [Abstract]: The growth of next-generation sequencing (NGS) datasets poses a challenge to the alignment of reads to reference genomes in terms of alignment quality and execution speed. Some available aligners have been shown ...
    • Parallel feature selection for distributed-memory clusters 

      González-Domínguez, Jorge; Bolón-Canedo, Verónica; Freire, Borja; Touriño, Juan (2019)
      [Abstract]: Feature selection is nowadays an extremely important data mining stage in the field of machine learning due to the appearance of problems of high dimensionality. In the literature there are numerous feature ...
    • The Phylogenetic Likelihood Library 

      Flouri, Tomas; Izquierdo-Carrasco, F.; Darriba, Diego; Aberer, Andre J.; Nguyen, Lam-Tung; Minh, B.Q.; Haeseler, Arndt von; Stamatakis, Alexandros (Oxford University Press, 2015-03-01)
      [Abstract] We introduce the Phylogenetic Likelihood Library (PLL), a highly optimized application programming interface for developing likelihood-based phylogenetic inference and postanalysis software. The PLL implements ...