Listar GI-GAC - Artigos por autor "Flouri, Tomas"

Mostrando ítems 1-3 de 3

    • EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences 

      Barbera, Pierre; Kozlov, Alexey M.; Czech, Lucas; Morel, Benoit; Darriba, Diego; Flouri, Tomas; Stamatakis, Alexandros (Oxford University Press, 2019-03-01)
      [Abstract]: Next generation sequencing (NGS) technologies have led to a ubiquity of molecular sequence data. This data avalanche is particularly challenging in metagenetics, which focuses on taxonomic identification of ...

    • ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models 

      Darriba, Diego; Posada, David; Kozlov, Alexey M.; Stamatakis, Alexandros; Morel, Benoit; Flouri, Tomas (Oxford University Press, 2019-08-21)
      [Abstract] ModelTest-NG is a reimplementation from scratch of jModelTest and ProtTest, two popular tools for selecting the best-fit nucleotide and amino acid substitution models, respectively. ModelTest-NG is one to two ...

    • The Phylogenetic Likelihood Library 

      Flouri, Tomas; Izquierdo-Carrasco, F.; Darriba, Diego; Aberer, Andre J.; Nguyen, Lam-Tung; Minh, B.Q.; Haeseler, Arndt von; Stamatakis, Alexandros (Oxford University Press, 2015-03-01)
      [Abstract] We introduce the Phylogenetic Likelihood Library (PLL), a highly optimized application programming interface for developing likelihood-based phylogenetic inference and postanalysis software. The PLL implements ...