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Efficient Parallel Numerical Solver for the Elastohydrodynamic Reynolds–Hertz Problem
(Elsevier BV * North-Holland, 2001-12-01)
[Abstract] This work presents a parallel version of a complex numerical algorithm for solving an elastohydrodynamic piezoviscous lubrication problem studied in tribology. The numerical algorithm combines regula falsi, fixed ...
A population-based iterated greedy algorithm for the delimitation and zoning of rural settlements
(Pergamon Press, 2013)
[Abstract] In this paper we present a Population-Based Iterated Greedy (PBIG) algorithm for delimiting and zoning rural settlements. Each cadastral plots is allocated to a category (traditional–historical, common or none) ...
XARK: an extensible framework for automatic recognition of computational kernels
(Association for Computing Machinery, 2008-10)
[Abstract] The recognition of program constructs that are frequently used by software developers is a powerful mechanism for optimizing and parallelizing compilers to improve the performance of the object code. The development ...
BDWatchdog: real-time monitoring and profiling of Big Data applications and frameworks
(Elsevier BV * North-Holland, 2018-10)
[Abstract] Current Big Data applications are characterized by a heavy use of system resources (e.g., CPU, disk) generally distributed across a cluster. To effectively improve their performance there is a critical need for ...
A Heuristic Approach for the Automatic Insertion of Checkpoints in Message-Passing Codes
(Technische Universitaet Graz * Institut fuer Informationssysteme und Computer Medien,Graz University of Technology, Institute for Information Systems and Computer Media, 2009-08)
[Abstract] Checkpointing tools may be typically implemented at two different abstraction levels: at the system level or at the application level. The latter has become a more popular alternative due to its flexibility and ...
Mobile Robot Positioning with 433-MHz Wireless Motes with Varying Transmission Powers and a Particle Filter
(Multidisciplinary Digital Publishing Institute, 2015)
In wireless positioning systems, the transmitter’s power is usually fixed. In this paper, we explore the use of varying transmission powers to increase the performance of a wireless localization system. To this extent, we ...
ParBiBit: Parallel tool for binary biclustering on modern distributed-memory systems
(PLoS, 2018)
[Abstract]: Biclustering techniques are gaining attention in the analysis of large-scale datasets as they identify two-dimensional submatrices where both rows and columns are correlated. In this work we present ParBiBit, ...
Does the choice of nucleotide substitution models matter topologically?
(BioMed Central Ltd., 2016-03-24)
[Abstract] Background: In the context of a master level programming practical at the computer science department of the Karlsruhe Institute of Technology, we developed and make available an open-source code for testing all ...
Parameter estimation in large-scale systems biology models: a parallel and self-adaptive cooperative strategy
(BioMed Central Ltd., 2017)
[Abstract]
Background
The development of large-scale kinetic models is one of the current key issues in computational systems biology and bioinformatics. Here we consider the problem of parameter estimation in nonlinear ...
ParDRe: faster parallel duplicated reads removal tool for sequencing studies
(Oxford University Press, 2016)
[Abstract] Summary: Current next generation sequencing technologies often generate duplicated or near-duplicated reads that (depending on the application scenario) do not provide any interesting biological information but ...