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Fault tolerance of MPI applications in exascale systems: The ULFM solution
(Elsevier BV * North-Holland, 2020-05)
[Abstract]
The growth in the number of computational resources used by high-performance computing (HPC) systems leads to an increase in failure rates. Fault-tolerant techniques will become essential for long-running ...
PolyBench/Python: Benchmarking Python Environments With Polyhedral Optimizations
(Association for Computing Machinery, 2021-03)
[Abstract]
Python has become one of the most used and taught languages nowadays. Its expressiveness, cross-compatibility and ease of use have made it popular in areas as diverse as finance, bioinformatics or machine ...
A Software Cache Autotuning Strategy for Dataflow Computing with UPC++ DepSpawn
(Wiley, 2021)
[Abstract] Dataflow computing allows to start computations as soon as all their dependencies are satisfied. This is particularly useful in applications with irregular or complex patterns of dependencies which would otherwise ...
Representing Integer Sequences Using Piecewise-Affine Loops
(MDPI, 2021)
[Abstract] A formal, high-level representation of programs is typically needed for static and dynamic analyses performed by compilers. However, the source code of target applications is not always available in an analyzable ...
Concept Drift Detection and Adaptation for Federated and Continual Learning
(Springer, 2021)
[Abstract] Smart devices, such as smartphones, wearables, robots, and others, can collect vast amounts of data from their environment. This data is suitable for training machine learning models, which can significantly ...
RGen: Data Generator for Benchmarking Big Data Workloads
(MDPI, 2021)
[Abstract] This paper presents RGen, a parallel data generator for benchmarking Big Data workloads, which integrates existing features and new functionalities in a standalone tool. The main functionalities developed in ...
Hardware Implementation of Statecharts for FPGA-based Control in Scientific Facilities
(Institute of Electrical and Electronics Engineers, 2020-01-16)
[Abstract]
The problem of generating complex synchronization patterns using automated tools is addressed in this paper. This work was originally motivated by the need of fast and jitter free synchronization in scientific ...
Performance Optimization of a Parallel Error Correction Tool
(MDPI, 2021)
[Abstract] Due to the continuous development in the field of Next Generation Sequencing (NGS) technologies that have allowed researchers to take advantage of greater genetic samples in less time, it is a matter of relevance ...
Parallel-FST: A feature selection library for multicore clusters
(Elsevier, 2022-11)
[Abstract]: Feature selection is a subfield of machine learning focused on reducing the dimensionality of datasets by performing a computationally intensive process. This work presents Parallel-FST, a publicly available ...
PATO: genome-wide prediction of lncRNA-DNA triple helices
(Oxford University Press, 2023-03)
[Abstract]: Motivation: Long non-coding RNA (lncRNA) plays a key role in many biological processes. For instance, lncRNA regulates chromatin using different molecular mechanisms, including direct RNA-DNA hybridization via ...