• Accelerating the quality control of genetic sequences through stream processing 

      Castellanos Rodríguez, Óscar; Expósito, Roberto R.; Touriño, Juan (Association for Computing Machinery, 2023)
      [Abstract]: Quality control of DNA sequences is an important data preprocessing step in many genomic analyses. However, all existing parallel tools for this purpose are based on a batch processing model, needing to have ...
    • SeQual-Stream: approaching stream processing to quality control of NGS datasets 

      Castellanos Rodríguez, Óscar; Expósito, Roberto R.; Touriño, Juan (BMC, 2023-10)
      [Abstract]: Background Quality control of DNA sequences is an important data preprocessing step in many genomic analyses. However, all existing parallel tools for this purpose are based on a batch processing model, ...
    • SeQual: Big Data Tool to Perform Quality Control and Data Preprocessing of Large NGS Datasets 

      Expósito, Roberto R.; Galego Torreiro, Roi; González-Domínguez, Jorge (Institute of Electrical and Electronics Engineers, 2020-08-07)
      [Abstract] This paper presents SeQual, a scalable tool to efficiently perform quality control of large genomic datasets. Our tool currently supports more than 30 different operations (e.g., filtering, trimming, formatting) ...