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Performance Evaluation of Big Data Frameworks for Large-Scale Data Analytics
(IEEE Computer Society, 2017-02-06)
[Abstract] The increasing adoption of Big Data analytics has led to a high demand for efficient technologies in order to manage and process large datasets. Popular MapReduce frameworks such as Hadoop are being replaced by ...
MarDRe: efficient MapReduce-based removal of duplicate DNA reads in the cloud
(Oxford University Press, 2017)
[Abstract] This article presents MarDRe, a de novo cloud-ready duplicate and near-duplicate removal tool that can process single- and paired-end reads from FASTQ/FASTA datasets. MarDRe takes advantage of the widely adopted ...