Buscar
Mostrando ítems 21-30 de 42
SeQual-Stream: approaching stream processing to quality control of NGS datasets
(BMC, 2023-10)
[Abstract]: Background
Quality control of DNA sequences is an important data preprocessing step in many genomic analyses. However, all existing parallel tools for this purpose are based on a batch processing model, ...
FastMPJ: a scalable and efficient Java message-passing library
(Springer New York LLC, 2014)
[Abstract] The performance and scalability of communications are key for high performance computing (HPC) applications in the current multi-core era. Despite the significant benefits (e.g., productivity, portability, ...
Enhancing in-memory Efficiency for MapReduce-based Data Processing
(Academic Press, 2018-10)
[Abstract] As the memory capacity of computational systems increases, the in-memory data management of Big Data processing frameworks becomes more crucial for performance. This paper analyzes and improves the memory ...
Design of scalable Java message-passing communications over InfiniBand
(Springer New York LLC, 2012-07)
[Abstract] This paper presents ibvdev a scalable and efficient low-level Java message-passing communication device over InfiniBand. The continuous increase in the number of cores per processor underscores the need for ...
General‐purpose computation on GPUs for high performance cloud computing
(John Wiley & Sons Ltd., 2013-08)
[Abstract] Cloud computing is offering new approaches for High Performance Computing (HPC) as it provides dynamically scalable resources as a service over the Internet. In addition, General‐Purpose computation on Graphical ...
Design of Scalable Java Communication Middleware for Multi-Core Systems
(Oxford University Press, 2013-02-01)
[Abstract] This paper presents smdev, a shared memory communication middleware for multi-core systems. smdev provides a simple and powerful messaging application program interface that is able to exploit the underlying ...
Evaluation of Java for General Purpose GPU Computing
(IEEE Computer Society, 2013-07-01)
[Abstract] The presence of many-core units as accelerators has been increasing due to their ability to improve the performance of highly parallel workloads. General Purpose GPU(GPGPU) computing has allowed the graphical ...
BigDEC: A multi-algorithm Big Data tool based on the k-mer spectrum method for scalable short-read error correction
(Elsevier, 2024-05)
[Abstract]: Despite the significant improvements in both throughput and cost provided by modern Next-Generation Sequencing (NGS) platforms, sequencing errors in NGS datasets can still degrade the quality of downstream ...
Analysis of I/O Performance on an Amazon EC2 Cluster Compute and High I/O Platform
(Springer Netherlands, 2013-12)
[Abstract] Cloud computing is currently being explored by the scientific community to assess its suitability for High Performance Computing (HPC) environments. In this novel paradigm, compute and storage resources, as well ...
Analysis and evaluation of MapReduce solutions on an HPC cluster
(Pergamon Press, 2016-02)
[Abstract] The ever growing needs of Big Data applications are demanding challenging capabilities which cannot be handled easily by traditional systems, and thus more and more organizations are adopting High Performance ...