Automatic Identification and Intuitive Map Representation of the Epiretinal Membrane Presence in 3D OCT Volumes

UDC.coleccionInvestigaciónes_ES
UDC.departamentoCiencias da Computación e Tecnoloxías da Informaciónes_ES
UDC.grupoInvGrupo de Visión Artificial e Recoñecemento de Patróns (VARPA)es_ES
UDC.issue23es_ES
UDC.journalTitleSensorses_ES
UDC.startPage5269es_ES
UDC.volume19es_ES
dc.contributor.authorBaamonde, Sergio
dc.contributor.authorMoura, Joaquim de
dc.contributor.authorNovo Buján, Jorge
dc.contributor.authorCharlón, Pablo
dc.contributor.authorOrtega Hortas, Marcos
dc.date.accessioned2019-12-26T10:12:36Z
dc.date.available2019-12-26T10:12:36Z
dc.date.issued2019-11-29
dc.description.abstract[Abstract] Optical Coherence Tomography (OCT) is a medical image modality providing high-resolution cross-sectional visualizations of the retinal tissues without any invasive procedure, commonly used in the analysis of retinal diseases such as diabetic retinopathy or retinal detachment. Early identification of the epiretinal membrane (ERM) facilitates ERM surgical removal operations. Moreover, presence of the ERM is linked to other retinal pathologies, such as macular edemas, being among the main causes of vision loss. In this work, we propose an automatic method for the characterization and visualization of the ERM’s presence using 3D OCT volumes. A set of 452 features is refined using the Spatial Uniform ReliefF (SURF) selection strategy to identify the most relevant ones. Afterwards, a set of representative classifiers is trained, selecting the most proficient model, generating a 2D reconstruction of the ERM’s presence. Finally, a post-processing stage using a set of morphological operators is performed to improve the quality of the generated maps. To verify the proposed methodology, we used 20 3D OCT volumes, both with and without the ERM’s presence, totalling 2428 OCT images manually labeled by a specialist. The most optimal classifier in the training stage achieved a mean accuracy of 91.9%. Regarding the post-processing stage, mean specificity values of 91.9% and 99.0% were obtained from volumes with and without the ERM’s presence, respectively.es_ES
dc.description.sponsorshipThis work is supported by the Instituto de Salud Carlos III, Government of Spain and FEDER funds of the European Union through the DTS18/00136 research projects and by the Ministerio de Ciencia, Innovación y Universidades, Government of Spain through the DPI2015-69948-R and RTI2018-095894-B-I00 research projects. Moreover, this work has received financial support from the European Union (European Regional Development Fund—ERDF) and the Xunta de Galicia, Grupos de Referencia Competitiva, Ref. ED431C 2016-047.es_ES
dc.description.sponsorshipXunta de Galicia; ED431C 2016-047es_ES
dc.identifier.citationBaamonde, S.; de Moura, J.; Novo, J.; Charlón, P.; Ortega, M. Automatic Identification and Intuitive Map Representation of the Epiretinal Membrane Presence in 3D OCT Volumes. Sensors 2019, 19, 5269. https://doi.org/10.3390/s19235269es_ES
dc.identifier.doi10.3390/s19235269
dc.identifier.issn1424-8220
dc.identifier.urihttp://hdl.handle.net/2183/24541
dc.language.isoenges_ES
dc.publisherMDPI AGes_ES
dc.relation.projectIDinfo:eu-repo/grantAgreement/MICINN/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/DTS18%2F00136/ES/Plataforma online para prevención y detección precoz de enfermedad vascular mediante análisis automatizado de información e imagen clínica
dc.relation.projectIDinfo:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/DPI2015-69948-R/ES/IDENTIFICACION Y CARACTERIZACION DEL EDEMA MACULAR DIABETICO MEDIANTE ANALISIS AUTOMATICO DE TOMOGRAFIAS DE COHERENCIA OPTICA Y TECNICAS DE APRENDIZAJE MAQUINA
dc.relation.projectIDinfo:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/RTI2018-095894-B-I00/ES/DESARROLLO DE TECNOLOGIAS INTELIGENTES PARA DIAGNOSTICO DE LA DMAE BASADAS EN EL ANALISIS AUTOMATICO DE NUEVAS MODALIDADES HETEROGENEAS DE ADQUISICION DE IMAGEN OFTALMOLOGICA
dc.relation.urihttps://doi.org/10.3390/s19235269es_ES
dc.rightsAtribución 4.0 Internacional (CC BY 4.0)es_ES
dc.rights.accessRightsopen accesses_ES
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/*
dc.subjectComputer-aided diagnosises_ES
dc.subjectRetinal imaginges_ES
dc.subjectOptical coherence tomographyes_ES
dc.subjectEpiretinal membranees_ES
dc.titleAutomatic Identification and Intuitive Map Representation of the Epiretinal Membrane Presence in 3D OCT Volumeses_ES
dc.typejournal articlees_ES
dspace.entity.typePublication
relation.isAuthorOfPublication028dac6b-dd82-408f-bc69-0a52e2340a54
relation.isAuthorOfPublication0fcd917d-245f-4650-8352-eb072b394df0
relation.isAuthorOfPublication1fb98665-ea68-4cd3-a6af-83e6bb453581
relation.isAuthorOfPublication.latestForDiscovery028dac6b-dd82-408f-bc69-0a52e2340a54

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