A new generative approach for optical coherence tomography data scarcity: unpaired mutual conversion between scanning presets
| UDC.coleccion | Investigación | es_ES |
| UDC.departamento | Ciencias da Computación e Tecnoloxías da Información | es_ES |
| UDC.grupoInv | Grupo de Visión Artificial e Recoñecemento de Patróns (VARPA) | es_ES |
| UDC.journalTitle | Medical & Biological Engineering & Computing | es_ES |
| dc.contributor.author | Gende, M. | |
| dc.contributor.author | Moura, Joaquim de | |
| dc.contributor.author | Novo Buján, Jorge | |
| dc.contributor.author | Penedo, Manuel | |
| dc.contributor.author | Ortega Hortas, Marcos | |
| dc.date.accessioned | 2023-03-21T19:17:24Z | |
| dc.date.available | 2023-03-21T19:17:24Z | |
| dc.date.issued | 2023-01-21 | |
| dc.description.abstract | [Abstract]: In optical coherence tomography (OCT), there is a trade-off between the scanning time and image quality, leading to a scarcity of high quality data. OCT platforms provide different scanning presets, producing visually distinct images, limiting their compatibility. In this work, a fully automatic methodology for the unpaired visual conversion of the two most prevalent scanning presets is proposed. Using contrastive unpaired translation generative adversarial architectures, low quality images acquired with the faster Macular Cube preset can be converted to the visual style of high visibility Seven Lines scans and vice-versa. This modifies the visual appearance of the OCT images generated by each preset while preserving natural tissue structure. The quality of original and synthetic generated images was compared using BRISQUE. The synthetic generated images achieved very similar scores to original images of their target preset. The generative models were validated in automatic and expert separability tests. These models demonstrated they were able to replicate the genuine look of the original images. This methodology has the potential to create multi-preset datasets with which to train robust computer-aided diagnosis systems by exposing them to the visual features of different presets they may encounter in real clinical scenarios without having to obtain additional data. | es_ES |
| dc.description.sponsorship | Instituto de Salud Carlos III; DTS18/00136 | es_ES |
| dc.description.sponsorship | Ministerio de Ciencia e Innovación; RTI2018-095894-B-I00 | es_ES |
| dc.description.sponsorship | Ministerio de Ciencia e Innovación; PID2019-108435RB-I00 | es_ES |
| dc.description.sponsorship | Ministerio de Ciencia e Innovación; TED2021-131201B-I00 | es_ES |
| dc.description.sponsorship | Ministerio de Ciencia e Innovación; PDC2022-133132-I00 | es_ES |
| dc.description.sponsorship | Xunta de Galicia; ED431C 2020/24 | es_ES |
| dc.description.sponsorship | Xunta de Galicia; ED481A 2021/161 | es_ES |
| dc.description.sponsorship | Axencia Galega de Innovación; IN845D 2020/38 | es_ES |
| dc.description.sponsorship | Xunta de Galicia; ED481B 2021/059 | es_ES |
| dc.description.sponsorship | Xunta de Galicia; ED431G 2019/01 | es_ES |
| dc.identifier.citation | Gende, M., de Moura, J., Novo, J. et al. A new generative approach for optical coherence tomography data scarcity: unpaired mutual conversion between scanning presets. Med Biol Eng Comput (2023). https://doi.org/10.1007/s11517-022-02742-6 | es_ES |
| dc.identifier.issn | 1741-0444 | |
| dc.identifier.uri | http://hdl.handle.net/2183/32729 | |
| dc.language.iso | eng | es_ES |
| dc.publisher | Springer | es_ES |
| dc.relation.uri | https://doi.org/10.1007/s11517-022-02742-6 | es_ES |
| dc.rights | Atribución 3.0 España | es_ES |
| dc.rights.accessRights | open access | es_ES |
| dc.rights.uri | http://creativecommons.org/licenses/by/3.0/es/ | * |
| dc.subject | Optical coherence tomography | es_ES |
| dc.subject | Generative adversarial network | es_ES |
| dc.subject | Style transfer | es_ES |
| dc.subject | Synthetic images | es_ES |
| dc.title | A new generative approach for optical coherence tomography data scarcity: unpaired mutual conversion between scanning presets | es_ES |
| dc.type | journal article | es_ES |
| dspace.entity.type | Publication | |
| relation.isAuthorOfPublication | e8d2dc13-e3b1-4371-bd62-be76a52134ee | |
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| relation.isAuthorOfPublication.latestForDiscovery | e8d2dc13-e3b1-4371-bd62-be76a52134ee |
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