A new generative approach for optical coherence tomography data scarcity: unpaired mutual conversion between scanning presets

UDC.coleccionInvestigaciónes_ES
UDC.departamentoCiencias da Computación e Tecnoloxías da Informaciónes_ES
UDC.grupoInvGrupo de Visión Artificial e Recoñecemento de Patróns (VARPA)es_ES
UDC.journalTitleMedical & Biological Engineering & Computinges_ES
dc.contributor.authorGende, M.
dc.contributor.authorMoura, Joaquim de
dc.contributor.authorNovo Buján, Jorge
dc.contributor.authorPenedo, Manuel
dc.contributor.authorOrtega Hortas, Marcos
dc.date.accessioned2023-03-21T19:17:24Z
dc.date.available2023-03-21T19:17:24Z
dc.date.issued2023-01-21
dc.description.abstract[Abstract]: In optical coherence tomography (OCT), there is a trade-off between the scanning time and image quality, leading to a scarcity of high quality data. OCT platforms provide different scanning presets, producing visually distinct images, limiting their compatibility. In this work, a fully automatic methodology for the unpaired visual conversion of the two most prevalent scanning presets is proposed. Using contrastive unpaired translation generative adversarial architectures, low quality images acquired with the faster Macular Cube preset can be converted to the visual style of high visibility Seven Lines scans and vice-versa. This modifies the visual appearance of the OCT images generated by each preset while preserving natural tissue structure. The quality of original and synthetic generated images was compared using BRISQUE. The synthetic generated images achieved very similar scores to original images of their target preset. The generative models were validated in automatic and expert separability tests. These models demonstrated they were able to replicate the genuine look of the original images. This methodology has the potential to create multi-preset datasets with which to train robust computer-aided diagnosis systems by exposing them to the visual features of different presets they may encounter in real clinical scenarios without having to obtain additional data.es_ES
dc.description.sponsorshipInstituto de Salud Carlos III; DTS18/00136es_ES
dc.description.sponsorshipMinisterio de Ciencia e Innovación; RTI2018-095894-B-I00es_ES
dc.description.sponsorshipMinisterio de Ciencia e Innovación; PID2019-108435RB-I00es_ES
dc.description.sponsorshipMinisterio de Ciencia e Innovación; TED2021-131201B-I00es_ES
dc.description.sponsorshipMinisterio de Ciencia e Innovación; PDC2022-133132-I00es_ES
dc.description.sponsorshipXunta de Galicia; ED431C 2020/24es_ES
dc.description.sponsorshipXunta de Galicia; ED481A 2021/161es_ES
dc.description.sponsorshipAxencia Galega de Innovación; IN845D 2020/38es_ES
dc.description.sponsorshipXunta de Galicia; ED481B 2021/059es_ES
dc.description.sponsorshipXunta de Galicia; ED431G 2019/01es_ES
dc.identifier.citationGende, M., de Moura, J., Novo, J. et al. A new generative approach for optical coherence tomography data scarcity: unpaired mutual conversion between scanning presets. Med Biol Eng Comput (2023). https://doi.org/10.1007/s11517-022-02742-6es_ES
dc.identifier.issn1741-0444
dc.identifier.urihttp://hdl.handle.net/2183/32729
dc.language.isoenges_ES
dc.publisherSpringeres_ES
dc.relation.urihttps://doi.org/10.1007/s11517-022-02742-6es_ES
dc.rightsAtribución 3.0 Españaes_ES
dc.rights.accessRightsopen accesses_ES
dc.rights.urihttp://creativecommons.org/licenses/by/3.0/es/*
dc.subjectOptical coherence tomographyes_ES
dc.subjectGenerative adversarial networkes_ES
dc.subjectStyle transferes_ES
dc.subjectSynthetic imageses_ES
dc.titleA new generative approach for optical coherence tomography data scarcity: unpaired mutual conversion between scanning presetses_ES
dc.typejournal articlees_ES
dspace.entity.typePublication
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