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A Fast Solver for Large Tridiagonal Systems on Multi-Core Processors (Lass Library)
(Institute of Electrical and Electronics Engineers, 2019)
[Abstract]: Many problems of industrial and scientific interest require the solving of tridiagonal linear systems. This paper presents several implementations for the parallel solving of large tridiagonal systems on ...
Speed and accuracy improvement of higher-order epistasis detection on CUDA-enabled GPUs
(Springer, 2017)
[Abstract]: The discovery of higher-order epistatic interactions is an important task in the field of genome wide association studies which allows for the identification of complex interaction patterns between multiple ...
Multithreaded and Spark parallelization of feature selection filters
(2016)
[Abstract]: Vast amounts of data are generated every day, constituting a volume that is challenging to analyze. Techniques such as feature selection are advisable when tackling large datasets. Among the tools that provide ...
High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs
(Elsevier B.V., 2015-07)
[Abstract]: Epistasis, the interaction between genes, has become a major topic in molecular and quantitative genetics. It is believed that these interactions play a significant role in genetic variations causing complex ...
Parallelization of shallow water simulations on current multi-threaded systems
(SAGE Journals, 2013-11)
[Abstract]: In this work, several parallel implementations of a numerical model of pollutant transport on a shallow water system are presented. These parallel implementations are developed in two phases. First, the sequential ...
Numerical Simulation of Pollutant Transport in a Shallow-Water System on the Cell Heterogeneous Processor
(Springer, 2013)
[Abstract] This paper presents an implementation, optimized for the Cell processor, of a finite volume numerical scheme for 2D shallow-water systems with pollutant transport. A description of the special architecture and ...
A multi-GPU shallow-water simulation with transport of contaminants
(Wiley, 2012)
[Abstract] This work presents cost-effective multi-graphics processing unit (GPU) parallel implementations of a finite-volume numerical scheme for solving pollutant transport problems in bidimensional domains. The fluid ...
FastMPJ: a scalable and efficient Java message-passing library
(Springer New York LLC, 2014)
[Abstract] The performance and scalability of communications are key for high performance computing (HPC) applications in the current multi-core era. Despite the significant benefits (e.g., productivity, portability, ...
Design and Implementation of an extended collectives library for unified Parallel C
(Springer New York LLC, 2013)
[Abstract] Unified Parallel C (UPC) is a parallel extension of ANSI C based on the Partitioned Global Address Space (PGAS) programming model, which provides a shared memory view that simplifies code development while it ...
Enhancing in-memory Efficiency for MapReduce-based Data Processing
(Academic Press, 2018-10)
[Abstract] As the memory capacity of computational systems increases, the in-memory data management of Big Data processing frameworks becomes more crucial for performance. This paper analyzes and improves the memory ...